MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,489
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,551
Total number of protein coding genes annotated/found:
2,489
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5043|JADGLK010000023.1
SEQF5043_00839
Genome Viewer
NA
AA
627/209
17502-18128
putative membrane protein
SEQF5043|JADGLK010000023.1
SEQF5043_00840
Genome Viewer
NA
AA
1197/399
19413-18217
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00841
Genome Viewer
NA
AA
1029/343
20802-19774
Ornithine cyclodeaminase
SEQF5043|JADGLK010000023.1
SEQF5043_00842
Genome Viewer
NA
AA
435/145
20950-21384
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00843
Genome Viewer
NA
AA
1545/515
22991-21447
L-asparagine permease 2
SEQF5043|JADGLK010000023.1
SEQF5043_00844
Genome Viewer
NA
AA
438/146
23371-23808
putative HTH-type transcriptional regulator
SEQF5043|JADGLK010000023.1
SEQF5043_00845
Genome Viewer
NA
AA
447/149
23825-24271
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00846
Genome Viewer
NA
AA
1839/613
26183-24345
Dihydroxy-acid dehydratase
SEQF5043|JADGLK010000023.1
SEQF5043_00847
Genome Viewer
NA
AA
1206/402
26494-27699
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
SEQF5043|JADGLK010000023.1
SEQF5043_00848
Genome Viewer
NA
AA
390/130
28100-27711
L-asparagine permease 1
SEQF5043|JADGLK010000023.1
SEQF5043_00849
Genome Viewer
NA
AA
576/192
28754-28179
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00850
Genome Viewer
NA
AA
735/245
29246-29980
HTH-type transcriptional regulator TreR
SEQF5043|JADGLK010000023.1
SEQF5043_00851
Genome Viewer
NA
AA
1662/554
30145-31806
Trehalose-6-phosphate hydrolase
SEQF5043|JADGLK010000023.1
SEQF5043_00852
Genome Viewer
NA
AA
918/306
32804-31887
Ribokinase
SEQF5043|JADGLK010000023.1
SEQF5043_00853
Genome Viewer
NA
AA
1053/351
33862-32810
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00854
Genome Viewer
NA
AA
1368/456
35232-33865
L-fucose-proton symporter
SEQF5043|JADGLK010000023.1
SEQF5043_00855
Genome Viewer
NA
AA
93/31
35326-35234
hypothetical protein
SEQF5043|JADGLK010000023.1
SEQF5043_00856
Genome Viewer
NA
AA
678/226
36139-35462
Deoxyribonucleoside regulator
SEQF5043|JADGLK010000023.1
SEQF5043_00857
Genome Viewer
NA
AA
1473/491
36528-38000
Xylulose kinase
SEQF5043|JADGLK010000023.1
SEQF5043_00858
Genome Viewer
NA
AA
573/191
38556-37984
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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